Stem-loop pbv-mir-1677

Accession

MI0030332

Description

Python bivittatus pbv-mir-1677 precursor miRNA

Sequence

gcugagguccugaACCAAAGCCCCUCGAGGACAAUgugcgucuuucuauUGACUUCAGUGGGCUUAGGAUCaggcccuuaaugcauag
(((((((.(((((.((.((((((((.((((.(((((..........))))).)))))).)))))).)).))))).)))))..))....

Structure

----  --     u     A  A      -  C    A     ugcg 
    gc  ugagg ccuga CC AAGCCC CU GAGG CAAUg    u
    ||  ||||| ||||| || |||||| || |||| |||||     
    cg  auucc ggaCU GG UUCGGG GA CUUC GUuau    c
gaua  ua     c     A  A      U  -    A     cuuu 

Annotation confidence Not enough data

Genome context

KE956408.1: 78917-79004 [-]

Mature pbv-miR-1677-5p

• Accession: MIMAT0039083
• Description: Python bivittatus pbv-miR-1677-5p mature miRNA
• Sequence: 14 - ACCAAAGCCCCUCGAGGACAAU - 35
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-1677-3p

• Accession: MIMAT0039084
• Description: Python bivittatus pbv-miR-1677-3p mature miRNA
• Sequence: 50 - UGACUUCAGUGGGCUUAGGAUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196