Stem-loop pbv-mir-5420

Accession

MI0030339

Description

Python bivittatus pbv-mir-5420 precursor miRNA

Sequence

acugacugagccuugcccagacaugggcacuuuucuuuuuuucuaaucuggAAAGUGCUUCAUUGUUUGGGUgaggcucugguucagg
.((((((((((((((((((((((((((((((((((..............))))))))).))).)))))))))))))))).)).)))).

Structure

a    -  -                -   -         uuuuuu 
 cuga cu gagccuugcccagaca ugg gcacuuuuc      u
 |||| || |||||||||||||||| ||| |||||||||       
 gacu gg cucggagUGGGUUUGU ACU CGUGAAAgg      c
g    u  u                U   U         ucuaau 

Annotation confidence Not enough data

Genome context

KE954489.1: 53530-53617 [+]

Mature pbv-miR-5420-3p

• Accession: MIMAT0039095
• Description: Python bivittatus pbv-miR-5420-3p mature miRNA
• Sequence: 52 - AAAGUGCUUCAUUGUUUGGGU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196