Stem-loop pbv-mir-9650

Accession

MI0030340

Description

Python bivittatus pbv-mir-9650 precursor miRNA

Sequence

ucauguauauucaCAGUGCAUCAUGGGAUAUGUAguugcuaaaaauaCAUUUCCUUUCAUGUGCUGUGuguaugccugag
(((.((((((.((((((((((...((((.(((((.((.....)).))))).))))...)))))))))).)))))).))).

Structure

-   u      u          CAU    U     g  g 
 uca guauau caCAGUGCAU   GGGA AUGUA uu c
 ||| |||||| ||||||||||   |||| ||||| || u
 agu cguaug GUGUCGUGUA   UCCU UACau aa a
g   c      u          CUU    U     a  a 

Annotation confidence Not enough data

Genome context

KE960999.1: 18240-18319 [-]

Mature pbv-miR-9650-5p

• Accession: MIMAT0039096
• Description: Python bivittatus pbv-miR-9650-5p mature miRNA
• Sequence: 14 - CAGUGCAUCAUGGGAUAUGUA - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-9650-3p

• Accession: MIMAT0039097
• Description: Python bivittatus pbv-miR-9650-3p mature miRNA
• Sequence: 48 - CAUUUCCUUUCAUGUGCUGUG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196