miRBase entry: mmu-mir-3154

Stem-loop mmu-mir-3154

Accession

MI0030343

Description

Mus musculus mmu-mir-3154 precursor miRNA mir-3154

Gene
family?

RF03301; mir-3154

Sequence

37 reads, 14 reads per million, 15 experiments

ggccccuccuucccaacccagcucccgcucaccccugccacgucaaaggaggCAGAAGGGGAGUCGGGAGCGGAgaggg
...(((((..(((.......((((((((((.((((((((.(......)..)))))..)))))).)))))))))))))))

Structure

ggc     cu   caaccca       -   a   --     -a gu 
   cccuc  ucc       gcucccg cuc ccc  cugcc  c  c
   |||||  |||       ||||||| ||| |||  |||||  |   
   gggag  AGG       CGAGGGC GAG GGG  GACgg  g  a
---     --   -------       U   -   AA     ag aa

Annotation confidence Not enough data

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Genome context

chr2: 32318265-32318343 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-3154

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-3154

Accession	MIMAT0035714
Description	Mus musculus mmu-miR-3154 mature miRNA
Sequence	53 - CAGAAGGGGAGUCGGGAGCGGA - 74
Evidence	experimental RNAseq-metaanalysis [1]
Database links
Predicted targets

References

PubMed ID: 23329697
Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
"Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
"RNA (2013) 19:365-379