Stem-loop mmu-mir-3618

Accession

MI0030345

Description

Mus musculus mmu-mir-3618 precursor miRNA

Literature search

3 open access papers mention mmu-mir-3618
(7 sentences)

Sequence

14 reads, 1 reads per million, 12 experiments

uaagcugagugcauUGUGAUUUCCAAUAAUUGAGGCagugguucuaaaagcuguCUACAUUAAUGAAAAGAGCAAUguggccagcuug
(((((((..((((((((..(((.((.((((..(((((((..........)))))))..)))).)).)))..))))))))..)))))))

Structure

       ag        GA   C  A    UG       gguu 
uaagcug  ugcauUGU  UUU CA UAAU  AGGCagu    c
|||||||  ||||||||  ||| || ||||  |||||||     
guucgac  gugUAACG  AAA GU AUUA  UCugucg    u
       cg        AG   A  A    CA       aaaa 

Annotation confidence Not enough data

Genome context

chr16: 18284550-18284637 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-3618

Mature mmu-miR-3618-5p

• Accession: MIMAT0035716
• Description: Mus musculus mmu-miR-3618-5p mature miRNA
• Sequence: 15 - UGUGAUUUCCAAUAAUUGAGGC - 36
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature mmu-miR-3618-3p

• Accession: MIMAT0035717
• Description: Mus musculus mmu-miR-3618-3p mature miRNA
• Sequence: 55 - CUACAUUAAUGAAAAGAGCAAU - 76
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379