Stem-loop mmu-mir-935

Accession

MI0030346

Description

Mus musculus mmu-mir-935 precursor miRNA mir-935

Gene
family

RF03944; mir-935

Literature search

8 open access papers mention mmu-mir-935
(14 sentences)

Sequence

2875 reads, 11.0 reads per million, 83 experiments

ggcggcggcgCGGGCGGCAGUGGCGGGAGCGGccccucggccauccuccgucugCCCAGUUACCGCUUCCGCUACCGCcgccgcucccgcu
(((((.((.((((.((((.(((((((((((((...((.(((............))).))...))))))))))))).)))))))))))))))

Structure

     c  c    G    A             ccc  c   caucc 
ggcgg gg gCGG CGGC GUGGCGGGAGCGG   cu ggc     u
||||| || |||| |||| |||||||||||||   || |||      
ucgcc cu cgcc gcCG CAUCGCCUUCGCC   GA CCg     c
     -  -    -    C             AUU  C   ucugc 

Annotation confidence Medium

Genome context

7: 3463582-3463672 [+]

Mature mmu-miR-935-5p

• Accession: MIMAT0050767
• Description: Mus musculus mmu-miR-935-5p mature miRNA
• Sequence: 11 - CGGGCGGCAGUGGCGGGAGCGG - 32
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature mmu-miR-935-3p

• Accession: MIMAT0035718
• Description: Mus musculus mmu-miR-935-3p mature miRNA
• Sequence: 55 - CCCAGUUACCGCUUCCGCUACCGC - 78
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379