Stem-loop rno-mir-148a

Accession

MI0030350

Description

Rattus norvegicus rno-mir-148a precursor miRNA

Literature search

26 open access papers mention rno-mir-148a
(46 sentences)

Sequence

30371404 reads, 37401 reads per million, 509 experiments

agccaguuuggucuuuugagacAAAGUUCUGAGACACUCUGACUCugaguaugauagaagUCAGUGCACUACAGAACUUUGucucuagaggcugugg
..(((...((((((((.((((((((((((((((.....(((((((((.......))).))))))....)).)))))))))))))).)))))))))))

Structure

ag   guu        u              -  ACACU      -   ag 
  cca   uggucuuu gagacAAAGUUCUG AG     CUGACU Cug  u
  |||   |||||||| |||||||||||||| ||     |||||| |||  a
  ggu   gucggaga cucuGUUUCAAGAC UC     GACUga gau  u
--   ---        u              A  -ACGU      a   ag 

Annotation confidence High

Genome context

chr4: 81013269-81013365 [-]

Mature rno-miR-148a-5p

• Accession: MIMAT0035724
• Description: Rattus norvegicus rno-miR-148a-5p mature miRNA
• Sequence: 23 - AAAGUUCUGAGACACUCUGACUC - 45
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-miR-148a-3p

• Accession: MIMAT0035725
• Description: Rattus norvegicus rno-miR-148a-3p mature miRNA
• Sequence: 61 - UCAGUGCACUACAGAACUUUG - 81
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379