Stem-loop rno-mir-15a

Accession

MI0030352

Description

Rattus norvegicus rno-mir-15a precursor miRNA

Literature search

37 open access papers mention rno-mir-15a
(148 sentences)

Sequence

270703 reads, 236 reads per million, 496 experiments

ccuuggaguaaagUAGCAGCACAUAAUGGUUUguggauuuugaaaaggugcAGGCCAUAUUGUGCUGCCUCAaaauacaagga
(((((.......(..((((((((..((((((((((.............))))))))))..))))))))..)......))))).

Structure

-     gaguaaa UA        UA          gauuu 
 ccuug       g  GCAGCACA  AUGGUUUgug     u
 |||||       |  ||||||||  ||||||||||     g
 ggaac       C  CGUCGUGU  UACCGGAcgu     a
a     -auaaaA UC        UA          ggaaa 

Annotation confidence Medium

Genome context

Unknown

Mature rno-miR-15a-5p

• Accession: MIMAT0035728
• Description: Rattus norvegicus rno-miR-15a-5p mature miRNA
• Sequence: 14 - UAGCAGCACAUAAUGGUUU - 32
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-miR-15a-3p

• Accession: MIMAT0035729
• Description: Rattus norvegicus rno-miR-15a-3p mature miRNA
• Sequence: 52 - AGGCCAUAUUGUGCUGCCUCA - 72
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379