Stem-loop rno-mir-5132

Accession

MI0030364

Description

Rattus norvegicus rno-mir-5132 precursor miRNA

Literature search

2 open access papers mention rno-mir-5132
(2 sentences)

Sequence

462 reads, 1.0 reads per million, 204 experiments

caggccgaCGUGGGGCGGUGGACCCAGGCUUcuggagcugaagCCUGAUGUUCCCCGUCCCGCAGcggccu
.((((((..(((((((((.((((.((((((((.......))))))))..)))).)))))))))..))))))

Structure

c      aC         U    -C        ug 
 aggccg  GUGGGGCGG GGAC  CAGGCUUc  g
 ||||||  ||||||||| ||||  ||||||||  a
 uccggc  CGCCCUGCC CUUG  GUCCgaag  g
-      GA         C    UA        uc 

Annotation confidence Medium

Genome context

chrX: 156716797-156716867 [+]

Mature rno-miR-5132-5p

• Accession: MIMAT0035750
• Description: Rattus norvegicus rno-miR-5132-5p mature miRNA
• Sequence: 9 - CGUGGGGCGGUGGACCCAGGCUU - 31
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-miR-5132-3p

• Accession: MIMAT0035751
• Description: Rattus norvegicus rno-miR-5132-3p mature miRNA
• Sequence: 44 - CCUGAUGUUCCCCGUCCCGCAG - 65
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379