Stem-loop chi-mir-1

Accession

MI0030587

Description

Capra hircus chi-mir-1 precursor miRNA

Literature search

9 open access papers mention chi-mir-1
(48 sentences)

Sequence

uaccugcuugggaaacauacuucuuuaugugcccauauggaccugcuaagcuaUGGAAUGUAAAGAAGUAUGUAUuucaggucgggaacucuc
..(((((((((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).))))))).)))).......

Structure

-----ua    -       a                gc     ---   a 
       ccug cuuggga acauacuucuuuaugu  ccaua   ugg c
       |||| ||||||| ||||||||||||||||  |||||   ||| c
       gggc ggacuuU UGUAUGAAGAAAUGUA  GGUau   auc u
cucucaa    u       A                -A     cga   g 

Annotation confidence Low

Genome context

chr13: 55656779-55656871 [-]

Mature chi-miR-1

• Accession: MIMAT0035896
• Description: Capra hircus chi-miR-1 mature miRNA
• Sequence: 54 - UGGAAUGUAAAGAAGUAUGUAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40