Stem-loop chi-mir-103

Accession

MI0030590

Description

Capra hircus chi-mir-103 precursor miRNA

Literature search

43 open access papers mention chi-mir-103
(263 sentences)

Sequence

496679 reads, 1526.0 reads per million, 36 experiments

gucuuugugcuuucAGCUUCUUUACAGUGCUGCCUUGUagcauucaggucaAGCAGCAUUGUACAGGGCUAUgaaagaacuaagaa
.((((.((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).)).)))).

Structure

g    u  g      --   U  U           C   U g a 
 ucuu gu cuuucA  GCU CU UACAGUGCUGC UUG a c u
 |||| || ||||||  ||| || ||||||||||| ||| | | u
 agaa ca gaaagU  CGG GA AUGUUACGACG Aac u g c
a    u  a      AU   -  C           -   - g a 

Annotation confidence High

Genome context

chr13: 51964308-51964393 [-]

Mature chi-miR-103-5p

• Accession: MIMAT0035901
• Description: Capra hircus chi-miR-103-5p mature miRNA
• Sequence: 15 - AGCUUCUUUACAGUGCUGCCUUGU - 38
• Evidence: experimental ; Illumina [1]

Mature chi-miR-103-3p

• Accession: MIMAT0035902
• Description: Capra hircus chi-miR-103-3p mature miRNA
• Sequence: 52 - AGCAGCAUUGUACAGGGCUAU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40