miRBase entry: chi-mir-105a

Stem-loop chi-mir-105a

Accession

MI0030591

Description

Capra hircus chi-mir-105a precursor miRNA

Sequence

ugugcaucguagUCAAAUGCUCAGACUCCUGUGGuggcugcucaugcaccacggauguuugagcaugugcuacggugucua
...(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).)))))))))))...

Structure

ugu         U  A          UC        gcug 
   gcaucguag CA AUGCUCAGAC  CUGUGGug    c
   ||||||||| || ||||||||||  ||||||||     
   uguggcauc gu uacgaguuug  ggcaccac    u
auc         -  g          ua        guac

Annotation confidence Not enough data

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Genome context

chrX: 56903737-56903817 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from chi-mir-105a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature chi-miR-105a

Accession	MIMAT0035903
Description	Capra hircus chi-miR-105a mature miRNA
Sequence	13 - UCAAAUGCUCAGACUCCUGUGG - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 23981187
Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
"Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
"Reprod Domest Anim (2014) 49:32-40