Stem-loop chi-mir-105b

Accession

MI0030592

Description

Capra hircus chi-mir-105b precursor miRNA

Sequence

ugugcaucguggUCAAAUGCUCAGACUCCUUGGUGgcugcuuacgcaCCACGGAUGUUUGAGCAUGUGCuauggugucua
...(((((((((.((.(((((((((((((.(((((..........))))).))).)))))))))).)))))))))))...

Structure

ugu         U  A          -   U     gcug 
   gcaucgugg CA AUGCUCAGAC UCC UGGUG    c
   ||||||||| || |||||||||| ||| |||||     
   ugugguauC GU UACGAGUUUG AGG ACCac    u
auc         -  G          U   C     gcau 

Annotation confidence Low

Genome context

chrX: 56905922-56906001 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from chi-mir-105b

Mature chi-miR-105b-5p

• Accession: MIMAT0035904
• Description: Capra hircus chi-miR-105b-5p mature miRNA
• Sequence: 13 - UCAAAUGCUCAGACUCCUUGGUG - 35
• Evidence: experimental ; Illumina [1]

Mature chi-miR-105b-3p

• Accession: MIMAT0035905
• Description: Capra hircus chi-miR-105b-3p mature miRNA
• Sequence: 48 - CCACGGAUGUUUGAGCAUGUGC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40