Stem-loop chi-mir-1224

Accession

MI0030601

Description

Capra hircus chi-mir-1224 precursor miRNA

Literature search

7 open access papers mention chi-mir-1224
(23 sentences)

Sequence

59 reads, 0.0 reads per million, 19 experiments

cccuugGUGAGGACUCGGGAGGUGGAGGguggugcugccagggccagggcgccgccucagcucgcuucuccccccaccuccucucuccucaggugcgcuugcag
.......((((((...(((((((((.(((.((.((.....((((..((((...))))..)))))).)).))).)))))))))...))))))..(((....))).

Structure

------cccuugG      CUC         A   u  u  ugcca    ca    g 
             UGAGGA   GGGAGGUGG GGg gg gc     gggc  gggc  
             ||||||   ||||||||| ||| || ||     ||||  |||| c
             acuccu   uccuccacc ccc cu cg     cucg  uccg  
gacguucgcgugg      cuc         c   u  u  -----    ac    c 

Annotation confidence Not enough data

Genome context

chr1: 85004246-85004349 [-]

Mature chi-miR-1224-5p

• Accession: MIMAT0035919
• Description: Capra hircus chi-miR-1224-5p mature miRNA
• Sequence: 7 - GUGAGGACUCGGGAGGUGGAGG - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40