Stem-loop chi-mir-1248

Accession

MI0030602

Description

Capra hircus chi-mir-1248 precursor miRNA

Literature search

1 open access papers mention chi-mir-1248
(1 sentences)

Sequence

uuuACCUUCUUGUAUAAGCACUGugcuaaaauuacagaaaccaagauaacuuugguuuuugugauaaugcuagcagaguauuaaacaagaagaagaggaacugca
.....((((((((.(((..(((.(((((..(((((((((((((((.....))))))))))))))).....))))).))).))).)))))))).............

Structure

--------uuuAC        A   GC   G     ---aa               a 
             CUUCUUGU UAA  ACU ugcua     auuacagaaaccaag u
             |||||||| |||  ||| |||||     ||||||||||||||| a
             gaagaaca auu  uga acgau     uaguguuuuugguuu a
acgucaaggagaa        a   -a   g     cguaa               c 

Annotation confidence Low

Genome context

chr1: 82475089-82475193 [-]

Mature chi-miR-1248-5p

• Accession: MIMAT0035920
• Description: Capra hircus chi-miR-1248-5p mature miRNA
• Sequence: 4 - ACCUUCUUGUAUAAGCACUG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40