Dead hairpin entry

Stem-loop chi-mir-1248

Accession

MI0030602

Description

Capra hircus chi-mir-1248 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

6 open access papers mention chi-mir-1248
(8 sentences)

Sequence

260 reads, 1.0 reads per million, 33 experiments

uuuACCUUCUUGUAUAAGCACUGUGCUaaaauuacagaaaccaagauaacuuugguuuuugugauaaugcuagcagaguauuaaaCAAGAAGAAGAGGAACUGCA
.....((((((((.(((..(((.(((((..(((((((((((((((.....))))))))))))))).....))))).))).))).)))))))).............

Structure

--------uuuAC        A   GC   G     ---aa               a 
             CUUCUUGU UAA  ACU UGCUa     auuacagaaaccaag u
             |||||||| |||  ||| |||||     ||||||||||||||| a
             GAAGAACa auu  uga acgau     uaguguuuuugguuu a
ACGUCAAGGAGAA        a   -a   g     cguaa               c