Stem-loop chi-mir-1249

Accession

MI0030603

Description

Capra hircus chi-mir-1249 precursor miRNA

Literature search

1 open access papers mention chi-mir-1249
(1 sentences)

Sequence

uccucagauucuuguuugcauggggaggagggaggagaugggccacguucccucugccuggaACGCCCUUCCCCCCCUUCUUCAccuagcgaacuccuacucguccuucaagac
.............((((((..(((((((((((.((.((.((((...(((((........))))))))).)).))))))))))).))..))))))........(((......)))

Structure

-------uccucagauucuu      au  -         a  a  u    cac     cuc 
                    guuugc  gg ggaggaggg gg ga gggc   guucc   u
                    ||||||  || ||||||||| || || ||||   |||||    
                    caagcg  cc CUUCUUCCC CC CU CCCG   CAagg   g
cagaacuuccugcucauccu      au  A         -  C  U    ---     ucc 

Annotation confidence Low

Genome context

AJPT02057647.1: 77-190 [+]

Mature chi-miR-1249

• Accession: MIMAT0035921
• Description: Capra hircus chi-miR-1249 mature miRNA
• Sequence: 63 - ACGCCCUUCCCCCCCUUCUUCA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40