Stem-loop chi-mir-124a

Accession

MI0030604

Description

Capra hircus chi-mir-124a precursor miRNA

Literature search

24 open access papers mention chi-mir-124a
(95 sentences)

Sequence

827 reads, 3.0 reads per million, 28 experiments

aucaagaucagacucugcccuccguguucacagcggaccuugauuuaaugucauacaauUAAGGCACGCGGUGAAUGCCaagagcggagccuacgggcggcugcacuugaa
.(((((..(((..(((((.((..((((((((.(((..((((((((...........))))))))..))).))))))))..)).)))))(((....)))..)))..))))).

Structure

a     au   ----------ac     c  cc        a   ga        uaau 
 ucaag  cag            ucugc cu  guguucac gcg  ccuugauu    g
 |||||  |||            ||||| ||  |||||||| |||  ||||||||    u
 aguuc  guc            aggcg ga  CGUAAGUG CGC  GGAAUuaa    c
a     ac   ggcgggcauccg     a  aC        G   AC        caua 

Annotation confidence Not enough data

Genome context

chr14: 40474234-40474344 [+]

Mature chi-miR-124a-5p

• Accession: MIMAT0035922
• Description: Capra hircus chi-miR-124a-5p mature miRNA
• Sequence: 60 - UAAGGCACGCGGUGAAUGCC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40