Stem-loop chi-mir-125b

Accession

MI0030606

Description

Capra hircus chi-mir-125b precursor miRNA

Literature search

110 open access papers mention chi-mir-125b
(655 sentences)

Sequence

4979198 reads, 14904.0 reads per million, 36 experiments

gacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguauuuuaguaacaucACAAGUCAGGCUCUUGGGACCUaggcggaggg
..((((.(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).))))..

Structure

ga    u     -    U    C   A        g  auu 
  cuuu ccuag UCCC GAGA CCU ACUUGUGA gu   u
  |||| ||||| |||| |||| ||| |||||||| ||   u
  gagg ggaUC AGGG UUCU GGA UGAACAcu ca   a
gg    c     C    -    C   C        a  aug 

Annotation confidence High

Genome context

chr1: 20759329-20759411 [-]

Mature chi-miR-125b-5p

• Accession: MIMAT0035925
• Description: Capra hircus chi-miR-125b-5p mature miRNA
• Sequence: 13 - UCCCUGAGACCCUAACUUGUGA - 34
• Evidence: experimental ; Illumina [1]

Mature chi-miR-125b-3p

• Accession: MIMAT0035926
• Description: Capra hircus chi-miR-125b-3p mature miRNA
• Sequence: 52 - ACAAGUCAGGCUCUUGGGACCU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40