Stem-loop chi-mir-1306

Accession

MI0030614

Description

Capra hircus chi-mir-1306 precursor miRNA

Literature search

1 open access papers mention chi-mir-1306
(1 sentences)

Sequence

gcgcugccccguggacagucuccaCCACCUCCCCUGCAAACGUCCagugaugcagacguaauggACGUUGGCUCUGGUGGUGAUGGacaggccgaacccccug
..((((((....)).)))).((((.((((.((...((.((((((((...(((....)))..)))))))).))...)).)))).))))((((........))))

Structure

gcgcugccccguggacaguc    C    U  CCU  A        gug   c 
                    ucca CACC CC   GC AACGUCCa   aug a
                    |||| |||| ||   || ||||||||   |||  
                    aGGU GUGG GG   CG UUGCAggu   ugc g
----gucccccaagccggac    A    U  UCU  G        -aa   a 

Annotation confidence Low

Genome context

chr17: 75044709-75044811 [+]

Mature chi-miR-1306-5p

• Accession: MIMAT0035939
• Description: Capra hircus chi-miR-1306-5p mature miRNA
• Sequence: 25 - CCACCUCCCCUGCAAACGUCC - 45
• Evidence: experimental ; Illumina [1]

Mature chi-miR-1306-3p

• Accession: MIMAT0035940
• Description: Capra hircus chi-miR-1306-3p mature miRNA
• Sequence: 65 - ACGUUGGCUCUGGUGGUGAUGG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40