Stem-loop chi-mir-1468

Accession

MI0030632

Description

Capra hircus chi-mir-1468 precursor miRNA

Sequence

352806 reads, 1039.0 reads per million, 36 experiments

gaagaggugggugguuuCUCCGUUUGCCUGUUUUGCUGAUGuucauuugacuuauucucAGCAAAAUAAGCAAAUGGAAAauucauccaucaac
.....(((((((((.((.(((((((((.(((((((((((..................))))))))))).))))))))).)).)))))))))...

Structure

gaaga         u  C         C           UGuucauu 
     ggugggugg uu UCCGUUUGC UGUUUUGCUGA        u
     ||||||||| || ||||||||| |||||||||||         
     cuaccuacu aA AGGUAAACG AUAAAACGAcu        g
--caa         u  A         A           cuuauuca 

Annotation confidence High

Genome context

chrX: 86439832-86439925 [-]

Mature chi-miR-1468-5p

• Accession: MIMAT0035969
• Description: Capra hircus chi-miR-1468-5p mature miRNA
• Sequence: 18 - CUCCGUUUGCCUGUUUUGCUGAUG - 41
• Evidence: experimental ; Illumina [1]

Mature chi-miR-1468-3p

• Accession: MIMAT0035970
• Description: Capra hircus chi-miR-1468-3p mature miRNA
• Sequence: 60 - AGCAAAAUAAGCAAAUGGAAA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40