Stem-loop chi-mir-146a

Accession

MI0030633

Description

Capra hircus chi-mir-146a precursor miRNA

Literature search

6 open access papers mention chi-mir-146a
(10 sentences)

Sequence

ccuauguguauccucagcuuUGAGAACUGAAUUCCAUAGGUUgugucagugucagaccugugaaguuuaguucuuuagcugggauaucucugucauccu
.......((((((.(((((..((((((((((((.((((((((.((.......)))))))))).)))))))))))).)))))))))))............

Structure

-----ccuaugu      u     uU            C        g  uc 
            guaucc cagcu  GAGAACUGAAUU CAUAGGUU ug  a
            |||||| |||||  |||||||||||| |||||||| ||  g
            uauagg gucga  uucuugauuuga guguccag ac  u
uccuacugucuc      -     -u            a        -  ug 

Annotation confidence Low

Genome context

chr7: 72031491-72031589 [+]

Mature chi-miR-146a

• Accession: MIMAT0035971
• Description: Capra hircus chi-miR-146a mature miRNA
• Sequence: 21 - UGAGAACUGAAUUCCAUAGGUU - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40