Stem-loop chi-mir-148a

Accession

MI0030636

Description

Capra hircus chi-mir-148a precursor miRNA

Literature search

6 open access papers mention chi-mir-148a
(21 sentences)

Sequence

caguuuggucuuuugaggcAAAGUUCUGAGACACUCCGACUcugaauaugauagaagUCAGUGCACUACAGAACUUUGUcucuag
..............((((((((((((((((.((((..(((((((.......))).))))))))..)).))))))))))))))...

Structure

caguuuggucuuuu              -  -A    CC    -   aa 
              gaggcAAAGUUCUG AG  CACU  GACU cug  u
              |||||||||||||| ||  ||||  |||| |||  a
              cucUGUUUCAAGAC UC  GUGA  CUga gau  u
-----------gau              A  AC    --    a   ag 

Annotation confidence Low

Genome context

chr4: 71633508-71633592 [+]

Mature chi-miR-148a-5p

• Accession: MIMAT0035976
• Description: Capra hircus chi-miR-148a-5p mature miRNA
• Sequence: 20 - AAAGUUCUGAGACACUCCGACU - 41
• Evidence: experimental ; Illumina [1]

Mature chi-miR-148a-3p

• Accession: MIMAT0035977
• Description: Capra hircus chi-miR-148a-3p mature miRNA
• Sequence: 58 - UCAGUGCACUACAGAACUUUGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40