Stem-loop chi-mir-181d

Accession

MI0030652

Description

Capra hircus chi-mir-181d precursor miRNA

Literature search

4 open access papers mention chi-mir-181d
(8 sentences)

Sequence

uccccucccuuaggccacagcaaaggucacaaucAACAUUCAUUGUUGUCGGUGGGUugugacggagaccagacccaccgagggaugaaugucacuguggcugggccagacacagccucgggggaauggg
.(((.((((((((((....((...(((((((....(((((((((....((((((((((.((........))))))))))))..)))))))))...)))))))..))........)))).))))))..)))

Structure

u   -c      -    ----caca  aaa       aucA         GUUG          g  acg 
 ccc  ucccuu aggc        gc   ggucaca    ACAUUCAUU    UCGGUGGGUu ug   g
 |||  |||||| ||||        ||   |||||||    |||||||||    |||||||||| ||    
 ggg  aggggg uccg        cg   ucggugu    uguaaguag    agccacccag ac   a
-   ua      c    acacagac  -gg       -cac         --gg          -  cag 

Annotation confidence Low

Genome context

chr7: 10034037-10034166 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-181d

Mature chi-miR-181d

• Accession: MIMAT0036005
• Description: Capra hircus chi-miR-181d mature miRNA
• Sequence: 35 - AACAUUCAUUGUUGUCGGUGGGU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40