Stem-loop chi-mir-1839

Accession

MI0030655

Description

Capra hircus chi-mir-1839 precursor miRNA

Literature search

2 open access papers mention chi-mir-1839
(4 sentences)

Sequence

9 reads, 0.0 reads per million, 9 experiments

aaugaaAAGGUAGACAGAACAGGUCUUGuuugcaaaaugaauuuaagacuuaguuaucuaccaacagcaaug
........((((((...(((((((((((....((...))....)))))))).))).))))))..........

Structure

--aaugaaAA      CAG   -        uuug  a 
          GGUAGA   AAC AGGUCUUG    ca  
          ||||||   ||| ||||||||    || a
          ccaucu   uug uucagaau    gu  
guaacgacaa      --a   a        uuaa  a 

Annotation confidence Not enough data

Genome context

chr14: 10445747-10445818 [-]

Mature chi-miR-1839-5p

• Accession: MIMAT0036008
• Description: Capra hircus chi-miR-1839-5p mature miRNA
• Sequence: 7 - AAGGUAGACAGAACAGGUCUUG - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40