Stem-loop chi-mir-187

Accession

MI0030658

Description

Capra hircus chi-mir-187 precursor miRNA

Literature search

14 open access papers mention chi-mir-187
(46 sentences)

Sequence

429 reads, 1.0 reads per million, 35 experiments

ggccgggcucccaacgacacggugugagaccucgggcuacaacacgggacccgggcgcugcuccgaccccUCGUGUCUUGUGUUGCAGCCggagggacgcagguccgca
.((.(((((.((........))((((...((((.((((.((((((((((((.(((((......)).)))...).))))))))))).)))).))))..))))))))))).

Structure

g  c     cccaacgacacgg    aga    g    a           - --c   -  cu 
 gc gggcu             ugug   ccuc ggcu caacacgggac c   ggg cg  g
 || |||||             ||||   |||| |||| ||||||||||| |   ||| ||   
 cg ccugg             acgc   ggag CCGA GUUGUGUUCUG G   ccc gc  c
a  -     -------------    -ag    g    C           U CUc   a  cu 

Annotation confidence Not enough data

Genome context

chr24: 22729914-22730022 [+]

Mature chi-miR-187-3p

• Accession: MIMAT0036012
• Description: Capra hircus chi-miR-187-3p mature miRNA
• Sequence: 71 - UCGUGUCUUGUGUUGCAGCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40