Stem-loop chi-mir-193b

Accession

MI0030667

Description

Capra hircus chi-mir-193b precursor miRNA

Literature search

1 open access papers mention chi-mir-193b
(1 sentences)

Sequence

ggaggcuguggucccagaauCGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCUuuuggggucauucuagacggcgagggauucag
....(((((((((((((((.((((((((((.((((.((.((.((.........)).)).)).)))).)))))))))).)))))))))).......)))))...........

Structure

-------ggag     -------          u          A    G  A  A  uua 
           gcugu       ggucccagaa CGGGGUUUUG GGGC AG UG gu   u
           |||||       |||||||||| |||||||||| |||| || || ||   g
           cggca       cugggguuuU GCCCUGAAAC CCCG UC Ac ua   u
gacuuagggag     gaucuua          C          A    G  A  c  uuu 

Annotation confidence Low

Genome context

Unknown

Mature chi-miR-193b-5p

• Accession: MIMAT0036027
• Description: Capra hircus chi-miR-193b-5p mature miRNA
• Sequence: 21 - CGGGGUUUUGAGGGCGAGAUGA - 42
• Evidence: experimental ; Illumina [1]

Mature chi-miR-193b-3p

• Accession: MIMAT0036028
• Description: Capra hircus chi-miR-193b-3p mature miRNA
• Sequence: 58 - AACUGGCCCACAAAGUCCCGCU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40