Stem-loop chi-mir-196a

Accession

MI0030671

Description

Capra hircus chi-mir-196a precursor miRNA

Literature search

6 open access papers mention chi-mir-196a
(11 sentences)

Sequence

ugaacuggaacugcugagugaauUAGGUAGUUUCAUGUUGUUGGgccuggauuucugaacacaacgacauuaaaccacccgacucacggcaguuacugcucc
......(((((((((..((((.((.(((.((((.((((((((((..(.........)..).))))))))).)))).))).)).))))))))))).)).....

Structure

ugaacu  -       ga    a  A   A    C         - gc ugg 
      gg aacugcu  guga uU GGU GUUU AUGUUGUUG G  c   a
      || |||||||  |||| || ||| |||| ||||||||| |  |   u
      uc uugacgg  cacu ag cca caaa uacagcaac c  g   u
-ccucg  a       --    c  c   c    u         a aa ucu 

Annotation confidence Low

Genome context

chr19: 38976510-38976611 [+]

Mature chi-miR-196a

• Accession: MIMAT0036032
• Description: Capra hircus chi-miR-196a mature miRNA
• Sequence: 24 - UAGGUAGUUUCAUGUUGUUGG - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40