Stem-loop chi-mir-199b

Accession

MI0030675

Description

Capra hircus chi-mir-199b precursor miRNA

Literature search

5 open access papers mention chi-mir-199b
(7 sentences)

Sequence

ccuccacuccgucuaCCCAGUGUUUAGACUAUCUGUUCaggacucccaaauuguACAGUAGUCUGCACAUUGGUUaggcugggcugggugagacccu
..(((((((.(((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).))))).))).)))).........

Structure

-------cc    -   c     C       U       U    U   gacu 
         ucca cuc gucua CCAGUGU UAGACUA CUGU Cag    c
         |||| ||| ||||| ||||||| ||||||| |||| |||     
         gggu ggg cggaU GGUUACA GUCUGAU GACA guu    c
ucccagagu    c   u     U       C       -    u   aaac 

Annotation confidence Low

Genome context

Unknown

Mature chi-miR-199b-5p

• Accession: MIMAT0036038
• Description: Capra hircus chi-miR-199b-5p mature miRNA
• Sequence: 16 - CCCAGUGUUUAGACUAUCUGUUC - 38
• Evidence: experimental ; Illumina [1]

Mature chi-miR-199b-3p

• Accession: MIMAT0036039
• Description: Capra hircus chi-miR-199b-3p mature miRNA
• Sequence: 55 - ACAGUAGUCUGCACAUUGGUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40