Stem-loop chi-mir-200b

Accession

MI0030680

Description

Capra hircus chi-mir-200b precursor miRNA

Literature search

9 open access papers mention chi-mir-200b
(16 sentences)

Sequence

gccaucgccaucuuacugggcagcauuggauggugucuggucucUAAUACUGCCUGGUAAUGAUGAcgcuggggcccugc
.(((.((.(((((((((((((((.((((((.((.......)))))))).))))))))))).)))).)).)))........

Structure

-------g   u  c    -           c      u  ug 
        cca cg cauc uuacugggcag auugga gg  u
        ||| || |||| ||||||||||| |||||| ||  c
        ggu gc GUAG AAUGGUCCGUC UAAUcu cu  u
cgucccgg   c  A    U           A      -  gg 

Annotation confidence Low

Genome context

chr16: 51960891-51960970 [-]

Mature chi-miR-200b

• Accession: MIMAT0036046
• Description: Capra hircus chi-miR-200b mature miRNA
• Sequence: 45 - UAAUACUGCCUGGUAAUGAUGA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40