Stem-loop chi-mir-206

Accession

MI0030684

Description

Capra hircus chi-mir-206 precursor miRNA

Literature search

6 open access papers mention chi-mir-206
(22 sentences)

Sequence

ugcuucccaaggccacaugcuucuuuauauccccauacggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGGUuucggcgagcg
.((((.((.(((((((((((((((((((((..(((((((((....)))).))))).))))))))))))))))))))).)).)))).

Structure

u    c  a                     cc     -    u 
 gcuu cc aggccacaugcuucuuuauau  ccaua cgga u
 |||| || |||||||||||||||||||||  ||||| ||||  
 cgag gg uuUGGUGUGUGAAGGAAUGUA  GGUau guuu a
g    c  c                     -A     c    c 

Annotation confidence Low

Genome context

chr23: 25415849-25415934 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-206

Mature chi-miR-206

• Accession: MIMAT0036052
• Description: Capra hircus chi-miR-206 mature miRNA
• Sequence: 53 - UGGAAUGUAAGGAAGUGUGUGGU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40