Stem-loop chi-mir-216b

Accession

MI0030692

Description

Capra hircus chi-mir-216b precursor miRNA

Literature search

4 open access papers mention chi-mir-216b
(50 sentences)

Sequence

208 reads, 1.0 reads per million, 27 experiments

guggcagacuggaAAAUCUCUGCAGGCAAAUGUGAUgucacuaaagaaaucacacacuuacccguagagauucuacagucugacau
(((.(((((((...(((((((((.((.((.((((((.((......)).))))))...)).)).)))))))))...))))))).)))

Structure

   g       gaA         A  C  --A      g  ac 
gug cagacug   AAUCUCUGC GG AA   UGUGAU uc  u
||| |||||||   ||||||||| || ||   |||||| ||   
uac gucugac   uuagagaug cc uu   acacua ag  a
   a       auc         c  a  cac      a  aa 

Annotation confidence Not enough data

Genome context

chr11: 39612771-39612856 [-]

Mature chi-miR-216b-5p

• Accession: MIMAT0036063
• Description: Capra hircus chi-miR-216b-5p mature miRNA
• Sequence: 14 - AAAUCUCUGCAGGCAAAUGUGAU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40