Stem-loop chi-mir-217

Accession

MI0030693

Description

Capra hircus chi-mir-217 precursor miRNA

Literature search

1 open access papers mention chi-mir-217
(1 sentences)

Sequence

aauauaauuaacagagauuuugaugucgcagaUACUGCAUCAGGAACUGAUUGGAuaagaaucggucacCAUCAGUUCCUCAUGCAUUGCcuucagcaucuaaacaagcaucaguaaaua
..............((((.((((....((((....(((((.((((((((((.((((........))).).)))))))))).)))))))))..)))).))))...................

Structure

-----aauauaauuaacag    u    uguc    aUAC     C          U -   aag 
                   agau uuga    gcag    UGCAU AGGAACUGAU G GAu   a
                   |||| ||||    ||||    ||||| |||||||||| | |||    
                   ucua gacu    CGUU    ACGUA UCCUUGACUA c cug   a
auaaaugacuacgaacaaa    c    --uc    ----     C          C a   gcu 

Annotation confidence Low

Genome context

chr11: 39587116-39587235 [-]

Mature chi-miR-217-5p

• Accession: MIMAT0036064
• Description: Capra hircus chi-miR-217-5p mature miRNA
• Sequence: 33 - UACUGCAUCAGGAACUGAUUGGA - 55
• Evidence: experimental ; Illumina [1]

Mature chi-miR-217-3p

• Accession: MIMAT0036065
• Description: Capra hircus chi-miR-217-3p mature miRNA
• Sequence: 70 - CAUCAGUUCCUCAUGCAUUGC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40