Stem-loop chi-mir-224

Accession

MI0030699

Description

Capra hircus chi-mir-224 precursor miRNA

Literature search

1 open access papers mention chi-mir-224
(1 sentences)

Sequence

gggcuuuCAAGUCACUAGUGGUUCCGUUUaguagaugguuguacauuguuucaAAAUGGUACCCUAGUGACUACAaagccc
(((((((..(((((((((.(((.((((((.(..((((......))))....).)))))).))))))))))))..)))))))

Structure

       CA         U   U      a --ua    gu 
gggcuuu  AGUCACUAG GGU CCGUUU g    gaug  u
|||||||  ||||||||| ||| |||||| |    ||||   
cccgaaA  UCAGUGAUC CCA GGUAAA c    uuac  g
       CA         -   U      a uuug    au 

Annotation confidence Not enough data

Genome context

chrX: 56575904-56575984 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-224

Mature chi-miR-224-5p

• Accession: MIMAT0036073
• Description: Capra hircus chi-miR-224-5p mature miRNA
• Sequence: 8 - CAAGUCACUAGUGGUUCCGUUU - 29
• Evidence: experimental ; Illumina [1]

Mature chi-miR-224-3p

• Accession: MIMAT0036074
• Description: Capra hircus chi-miR-224-3p mature miRNA
• Sequence: 54 - AAAUGGUACCCUAGUGACUACA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40