miRBase entry: chi-mir-23a

Stem-loop chi-mir-23a

Accession

MI0030711

Description

Capra hircus chi-mir-23a precursor miRNA

Literature search

4 open access papers mention chi-mir-23a
(9 sentences)

Sequence

uggccggcugggguuccuggggaugggauuugcugccugucacaaAUCACAUUGCCAGGGAUUUCCaaccgaccc
.((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).)).

Structure

u  c   c     -       g    g      c  c 
 gg cgg ugggg uuccugg gaug gauuug ug c
 || ||| ||||| ||||||| |||| |||||| || u
 cc gcc aCCUU AGGGACC UUAC CUAaac ac g
c  a   a     U       G    A      -  u

Annotation confidence Not enough data

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Genome context

chr7: 10075323-10075397 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-23a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature chi-miR-23a

Accession	MIMAT0036087
Description	Capra hircus chi-miR-23a mature miRNA
Sequence	46 - AUCACAUUGCCAGGGAUUUCC - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 23981187
Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
"Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
"Reprod Domest Anim (2014) 49:32-40