Stem-loop chi-mir-23a

Accession

MI0030711

Description

Capra hircus chi-mir-23a precursor miRNA

Literature search

4 open access papers mention chi-mir-23a
(9 sentences)

Sequence

uggccggcugggguuccuggggaugggauuugcugccugucacaaAUCACAUUGCCAGGGAUUUCCaaccgaccc
.((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).)).

Structure

u  c   c     -       g    g      c  c 
 gg cgg ugggg uuccugg gaug gauuug ug c
 || ||| ||||| ||||||| |||| |||||| || u
 cc gcc aCCUU AGGGACC UUAC CUAaac ac g
c  a   a     U       G    A      -  u 

Annotation confidence Low

Genome context

chr7: 10075323-10075397 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-23a

Mature chi-miR-23a

• Accession: MIMAT0036087
• Description: Capra hircus chi-miR-23a mature miRNA
• Sequence: 46 - AUCACAUUGCCAGGGAUUUCC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40