Stem-loop chi-mir-2411

Accession

MI0030715

Description

Capra hircus chi-mir-2411 precursor miRNA

Literature search

2 open access papers mention chi-mir-2411
(2 sentences)

Sequence

1951 reads, 6.0 reads per million, 36 experiments

agaggaaaUGUGGAGUGACUGUCAGAUGCAGccagcagaauaagugguuuggcUGAACUGUCUUACUCCCACAUC
.......(((((((((((..(.(((.(.(((((((((.......))..)))))))).))).)))))).)))))).

Structure

agaggaa      -     CU U   A G       --  ga 
       aUGUGG AGUGA  G CAG U CAGccag  ca  a
       |||||| |||||  | ||| | |||||||  ||  u
       UACACC UCAUU  C GUC A GUcgguu  gu  a
------C      C     -- U   A -       ug  ga 

Annotation confidence Medium

Genome context

chr3: 16979525-16979599 [-]

Mature chi-miR-2411-5p

• Accession: MIMAT0036093
• Description: Capra hircus chi-miR-2411-5p mature miRNA
• Sequence: 9 - UGUGGAGUGACUGUCAGAUGCAG - 31
• Evidence: experimental ; Illumina [1]

Mature chi-miR-2411-3p

• Accession: MIMAT0036094
• Description: Capra hircus chi-miR-2411-3p mature miRNA
• Sequence: 54 - UGAACUGUCUUACUCCCACAUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40