Stem-loop chi-mir-26a

Accession

MI0030720

Description

Capra hircus chi-mir-26a precursor miRNA

Literature search

11 open access papers mention chi-mir-26a
(20 sentences)

Sequence

aaggccguggccucgUUCAAGUAAUCCAGGAUAGGCUgugcaggucccaaggggCCUAUUCUCGGUUACUUGCACGcggacgcgggccug
.((((((((.((.(((.(((((((((.((((((((((.(...........).)))))))))).))))))))).))).)).))).))))).

Structure

a     -   g  u   U         C          g gcag 
 aggcc gug cc cgU CAAGUAAUC AGGAUAGGCU u    g
 ||||| ||| || ||| ||||||||| |||||||||| |    u
 uccgg cgc gg GCA GUUCAUUGG UCUUAUCCgg g    c
g     g   a  c   C         C          g aacc 

Annotation confidence Low

Genome context

chr22: 11745483-11745572 [+]

Mature chi-miR-26a-5p

• Accession: MIMAT0036101
• Description: Capra hircus chi-miR-26a-5p mature miRNA
• Sequence: 16 - UUCAAGUAAUCCAGGAUAGGCU - 37
• Evidence: experimental ; Illumina [1]

Mature chi-miR-26a-3p

• Accession: MIMAT0036102
• Description: Capra hircus chi-miR-26a-3p mature miRNA
• Sequence: 55 - CCUAUUCUCGGUUACUUGCACG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40