Stem-loop chi-mir-301b

Accession

MI0030730

Description

Capra hircus chi-mir-301b precursor miRNA

Sequence

ccuccugcuggccgcaggugcucugacgagguugcacuacugugcuuugaggagCAGUGCAAUGAUAUUGUCAAAGCauccgggaccagccuuggag
.((((.(((((((.(.((((((.((((((.((((((((.....((((....))))))))))))....)))))).)))))).))).)))))...))))

Structure

c    --u     -  g a      c      ---g        acugu    u 
 cucc   gcugg cc c ggugcu ugacga    guugcacu     gcuu g
 ||||   ||||| || | |||||| ||||||    ||||||||     ||||  
 gagg   cgacc gg g cuaCGA ACUGUU    UAACGUGA     Cgag a
-    uuc     a  - c      A      AUAG        -----    g 

Annotation confidence Low

Genome context

AJPT02103319.1: 195772-195868 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-301b

Mature chi-miR-301b

• Accession: MIMAT0036120
• Description: Capra hircus chi-miR-301b mature miRNA
• Sequence: 55 - CAGUGCAAUGAUAUUGUCAAAGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40