Stem-loop chi-mir-30a

Accession

MI0030731

Description

Capra hircus chi-mir-30a precursor miRNA

Literature search

8 open access papers mention chi-mir-30a
(14 sentences)

Sequence

ucccugugacagugagcggcUGUAAACAUCCUCGACUGGAAGCUgugaggcugcagaaaggCUUUCAGUCGGAUGUUUGCAGcugcugacugccgcccacgucagga
..((((((.((((.(((((((((((((((((..(((((((((((...............)))))))))))))))))))))))))))).)))).))).......))).

Structure

uc   -------   a    g                 UC           gugagg 
  ccu       gug cagu agcggcUGUAAACAUCC  GACUGGAAGCU      c
  |||       ||| |||| |||||||||||||||||  |||||||||||      u
  gga       cgc guca ucgucGACGUUUGUAGG  CUGACUUUCgg      g
-a   cugcacc   c    g                 --           aaagac 

Annotation confidence Low

Genome context

chr14: 2517238-2517344 [+]

Mature chi-miR-30a-5p

• Accession: MIMAT0036121
• Description: Capra hircus chi-miR-30a-5p mature miRNA
• Sequence: 21 - UGUAAACAUCCUCGACUGGAAGCU - 44
• Evidence: experimental ; Illumina [1]

Mature chi-miR-30a-3p

• Accession: MIMAT0036122
• Description: Capra hircus chi-miR-30a-3p mature miRNA
• Sequence: 62 - CUUUCAGUCGGAUGUUUGCAG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40