Stem-loop chi-mir-324

Accession

MI0030740

Description

Capra hircus chi-mir-324 precursor miRNA

Literature search

8 open access papers mention chi-mir-324
(16 sentences)

Sequence

7813 reads, 24.0 reads per million, 36 experiments

cugaacuggcuaugccucccCGCAUCCCCUAGGGCAUUGGUGUaaagcuggagacccACUGCCCCAGGUGCUGCUGGggguuguagucugaccc
.......(((((((.(((((.(((.(.(((.(((((.(((.((..........))))).))))).))).).))).))))).)))))))......

Structure

cugaacu       c     C   U C   A     U   U  aaag 
       ggcuaug cuccc GCA C CCU GGGCA UGG GU    c
       ||||||| ||||| ||| | ||| ||||| ||| ||     
       cugaugu gggGG CGU G GGA CCCGU Acc ca    u
-cccagu       u     U   C U   C     C   -  gagg 

Annotation confidence High

Genome context

chr19: 27600177-27600270 [-]

Mature chi-miR-324-5p

• Accession: MIMAT0036135
• Description: Capra hircus chi-miR-324-5p mature miRNA
• Sequence: 21 - CGCAUCCCCUAGGGCAUUGGUGU - 43
• Evidence: experimental ; Illumina [1]

Mature chi-miR-324-3p

• Accession: MIMAT0036136
• Description: Capra hircus chi-miR-324-3p mature miRNA
• Sequence: 58 - ACUGCCCCAGGUGCUGCUGG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40