miRBase entry: chi-mir-329b

Stem-loop chi-mir-329b

Accession

MI0030744

Description

Capra hircus chi-mir-329b precursor miRNA

Literature search

1 open access papers mention chi-mir-329b
(1 sentences)

Sequence

cacugguguucuggucaguguucacccaugguaccugaagagagguuuucuggguuucuguuucuuuaaugaggaugaAACACACCUGGUUAACCUCUuuuccaguaucaaaucccaucuugaa
....((((..(........)..))))..((((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..))))))..............

Structure

cacugguguucuggucaguguucaccca      cu           uu      uuc      u  aa 
                            ugguac  gaagagagguu  cugggu   uguuuc uu  u
                            ||||||  |||||||||||  ||||||   |||||| ||   
                            acuaug  cuuuUCUCCAA  GGUCCA   ACAAag ag  g
--------------aaguucuacccuaa      ac           UU      --C      u  ga

Annotation confidence Not enough data

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Genome context

chr21: 67105074-67105197 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from chi-mir-329b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature chi-miR-329b-3p

Accession	MIMAT0036142
Description	Capra hircus chi-miR-329b-3p mature miRNA
Sequence	79 - AACACACCUGGUUAACCUCU - 98
Evidence	experimental Illumina [1]

References

PubMed ID: 23981187
Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
"Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
"Reprod Domest Anim (2014) 49:32-40