Stem-loop chi-mir-3431

Accession

MI0030753

Description

Capra hircus chi-mir-3431 precursor miRNA

Literature search

1 open access papers mention chi-mir-3431
(1 sentences)

Sequence

auacccaaugaaugcgaaaaCCUCAGUCAGCCUUGUGGAUGUauguucugcagaccugacAUCUAGAGGACUGACUGAAAUUuucacuuucagcuaa
........((((.(.(((((..((((((((((((.(((((((..(.((....)).)..))))))))))).))))))))..))))).).)))).....

Structure

auacccaa    u c     CC        -    G       au u  u 
        ugaa g gaaaa  UCAGUCAG CCUU UGGAUGU  g uc g
        |||| | |||||  |||||||| |||| |||||||  | ||  
        acuu c cuuUU  AGUCAGUC GGAG AUCUAca  c ag c
---aaucg    u a     AA        A    -       gu c  a 

Annotation confidence Low

Genome context

chrX: 56573960-56574056 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-3431

Mature chi-miR-3431-5p

• Accession: MIMAT0036159
• Description: Capra hircus chi-miR-3431-5p mature miRNA
• Sequence: 21 - CCUCAGUCAGCCUUGUGGAUGU - 42
• Evidence: experimental ; Illumina [1]

Mature chi-miR-3431-3p

• Accession: MIMAT0036160
• Description: Capra hircus chi-miR-3431-3p mature miRNA
• Sequence: 61 - AUCUAGAGGACUGACUGAAAUU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40