Stem-loop chi-mir-369

Accession

MI0030764

Description

Capra hircus chi-mir-369 precursor miRNA

Literature search

1 open access papers mention chi-mir-369
(2 sentences)

Sequence

agcaucucuccugguaccugaagggAGAUCGACCGUGUUAUAUUCGcuuuauugacuucgAAUAAUACAUGGUUGAUCUUUucucaguaucaaaucucaccuuggag
.......((((((((((.(((.((((((((((((((((..((((((............))))))..)))))))))))))))).)))))))))...........))))

Structure

agcaucu    -----------      c   a                UA      cuuua 
       cucc           ugguac uga gggAGAUCGACCGUGU  UAUUCG     u
       ||||           |||||| ||| ||||||||||||||||  ||||||      
       gagg           acuaug acu uUUUCUAGUUGGUACA  AUAAgc     u
-------    uuccacucuaa      -   c                UA      uucag 

Annotation confidence Not enough data

Genome context

chr21: 67143159-67143265 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from chi-mir-369

Mature chi-miR-369-5p

• Accession: MIMAT0036178
• Description: Capra hircus chi-miR-369-5p mature miRNA
• Sequence: 26 - AGAUCGACCGUGUUAUAUUCG - 46
• Evidence: experimental ; Illumina [1]

Mature chi-miR-369-3p

• Accession: MIMAT0036179
• Description: Capra hircus chi-miR-369-3p mature miRNA
• Sequence: 61 - AAUAAUACAUGGUUGAUCUUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40