Stem-loop chi-mir-374b

Accession

MI0030766

Description

Capra hircus chi-mir-374b precursor miRNA

Literature search

1 open access papers mention chi-mir-374b
(1 sentences)

Sequence

gaagaaauccuacucggauggAUAUAAUACAACCUGCUAAGUGuccuagcaCUUAUCAGGUUGUAUUAUCAUUguccgugucuauggcucucgucuaccagacucuaaauucc
((((..((...((.(((((((..(((((((((((((.(((((((....))))))).)))))))))))))..))))))).))..))..)).))((((...))))..........

Structure

---------------------  -  aa  ccu  u       AU             C       c 
                     ga ag  au   ac cggaugg  AUAAUACAACCUG UAAGUGu c
                     || ||  ||   || |||||||  ||||||||||||| |||||||  
                     cu uc  ua   ug gccugUU  UAUUAUGUUGGAC AUUCacg u
ccuuaaaucucagaccaucug  c  gg  -uc  u       AC             U       a 

Annotation confidence Low

Genome context

chrX: 72776625-72776737 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-374b

Mature chi-miR-374b-5p

• Accession: MIMAT0036182
• Description: Capra hircus chi-miR-374b-5p mature miRNA
• Sequence: 22 - AUAUAAUACAACCUGCUAAGUG - 43
• Evidence: experimental ; Illumina [1]

Mature chi-miR-374b-3p

• Accession: MIMAT0036183
• Description: Capra hircus chi-miR-374b-3p mature miRNA
• Sequence: 52 - CUUAUCAGGUUGUAUUAUCAUU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40