miRBase entry: chi-mir-374b

Stem-loop chi-mir-374b

Accession

MI0030766

Description

Capra hircus chi-mir-374b precursor miRNA

Literature search

1 open access papers mention chi-mir-374b
(1 sentences)

Sequence

gaagaaauccuacucggauggAUAUAAUACAACCUGCUAAGUGuccuagcaCUUAUCAGGUUGUAUUAUCAUUguccgugucuauggcucucgucuaccagacucuaaauucc
((((..((...((.(((((((..(((((((((((((.(((((((....))))))).)))))))))))))..))))))).))..))..)).))((((...))))..........

Structure

---------------------  -  aa  ccu  u       AU             C       c 
                     ga ag  au   ac cggaugg  AUAAUACAACCUG UAAGUGu c
                     || ||  ||   || |||||||  ||||||||||||| |||||||  
                     cu uc  ua   ug gccugUU  UAUUAUGUUGGAC AUUCacg u
ccuuaaaucucagaccaucug  c  gg  -uc  u       AC             U       a

Annotation confidence Not enough data

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Genome context

chrX: 72776625-72776737 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-374b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature chi-miR-374b-5p

Accession	MIMAT0036182
Description	Capra hircus chi-miR-374b-5p mature miRNA
Sequence	22 - AUAUAAUACAACCUGCUAAGUG - 43
Evidence	experimental Illumina [1]

Mature chi-miR-374b-3p

Accession	MIMAT0036183
Description	Capra hircus chi-miR-374b-3p mature miRNA
Sequence	52 - CUUAUCAGGUUGUAUUAUCAUU - 73
Evidence	experimental Illumina [1]

References

PubMed ID: 23981187
Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
"Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
"Reprod Domest Anim (2014) 49:32-40