Stem-loop chi-mir-376c

Accession

MI0030769

Description

Capra hircus chi-mir-376c precursor miRNA

Literature search

1 open access papers mention chi-mir-376c
(1 sentences)

Sequence

ggacuaaauccuucuuugguauuuaaaaGGUGGAUAUUCCUUCUAUGUUUauguuauuuaugguuaAACAUAGAGGAAAUUCCACGUuuucaguaucaaaugcugcuuggaa
(((.....)))...(((((((((.((((.(((((..(((((.(((((((((.............))))))))))))))..))))).)))).)))))))))............

Structure

ggacuaaauccuuc         u    G     UA     U         uguua 
              uuugguauu aaaa GUGGA  UUCCU CUAUGUUUa     u
              ||||||||| |||| |||||  ||||| |||||||||     u
              aaacuauga uuuU CACCU  AAGGA GAUACAAau     u
--aagguucgucgu         c    G     UA     -         uggua 

Annotation confidence Low

Genome context

chr21: 67116853-67116964 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from chi-mir-376c

Mature chi-miR-376c-5p

• Accession: MIMAT0036187
• Description: Capra hircus chi-miR-376c-5p mature miRNA
• Sequence: 29 - GGUGGAUAUUCCUUCUAUGUUU - 50
• Evidence: experimental ; Illumina [1]

Mature chi-miR-376c-3p

• Accession: MIMAT0036188
• Description: Capra hircus chi-miR-376c-3p mature miRNA
• Sequence: 67 - AACAUAGAGGAAAUUCCACGU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40