Stem-loop chi-mir-383

Accession

MI0030778

Description

Capra hircus chi-mir-383 precursor miRNA

Literature search

10 open access papers mention chi-mir-383
(96 sentences)

Sequence

196 reads, 1.0 reads per million, 30 experiments

cuccacgucaccugcuccucAGAUCAGAAGGUGAUUGUGGCUUuggguggauauuaaucagccacagcacugccuggucagaaagagcaaguguccuagccuuuuaccuca
......(.(((.(((((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..))))).))).)................

Structure

----------cuccac u   c     -c  A      AA    A        Uug   gga 
                g cac ugcuc  uc GAUCAG  GGUG UUGUGGCU   ggu   u
                | ||| |||||  || ||||||  |||| ||||||||   |||    
                c gug acgag  ag cugguc  ucac gacaccga   cua   a
acuccauuuuccgauc u   a     aa  a      cg    -        ---   auu 

Annotation confidence Not enough data

Genome context

chr27: 22241270-22241380 [+]

Mature chi-miR-383-5p

• Accession: MIMAT0036202
• Description: Capra hircus chi-miR-383-5p mature miRNA
• Sequence: 21 - AGAUCAGAAGGUGAUUGUGGCUU - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40