Stem-loop chi-mir-3955

Accession

MI0030779

Description

Capra hircus chi-mir-3955 precursor miRNA

Sequence

augguuugaaagugugggauacaUUUGAUGGCUGAUCCUCUCACUacuuuauaccuuggguagUGGGAUUUUAGUCCAUCAUAGAGcaagcagauuuguuuucacc
..(((....((((.((.........((((((((((...(((((((((((........)))))))))))..)))).)))))).........)).))))......)))

Structure

au   --uuga    g  ggauacaUU      -    UCC           uau 
  ggu      aagu ug         UGAUGG CUGA   UCUCACUacuu   a
  |||      |||| ||         |||||| ||||   |||||||||||    
  cca      uuua ac         ACUACC GAUU   AGGGUgauggg   c
--   cuuuug    g  gaacGAGAU      U    -UU           uuc 

Annotation confidence Low

Genome context

chr21: 67078969-67079074 [+]

Mature chi-miR-3955-5p

• Accession: MIMAT0036203
• Description: Capra hircus chi-miR-3955-5p mature miRNA
• Sequence: 24 - UUUGAUGGCUGAUCCUCUCACU - 45
• Evidence: experimental ; Illumina [1]

Mature chi-miR-3955-3p

• Accession: MIMAT0036204
• Description: Capra hircus chi-miR-3955-3p mature miRNA
• Sequence: 64 - UGGGAUUUUAGUCCAUCAUAGAG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40