Stem-loop chi-mir-493

Accession

MI0030807

Description

Capra hircus chi-mir-493 precursor miRNA

Literature search

5 open access papers mention chi-mir-493
(16 sentences)

Sequence

ggggcucccucuggcccccagggccUUGUACAUGGUAGGCUUUCAUUcauucguuugcacauucggUGAAGGUCUACUGUGUGCCAGGcccugugccaggcagcaaguaaaugga
...(((...((((((...((((((((.((((((((((((((((((((.................)))))))))))))))))))).)))))))).)))))).)))...........

Structure

--------ggg   ccc      ccc        U                    cauucgu 
           gcu   ucuggc   cagggccU GUACAUGGUAGGCUUUCAUU       u
           |||   ||||||   |||||||| ||||||||||||||||||||       u
           cga   ggaccg   gucccGGA CGUGUGUCAUCUGGAAGUgg       g
agguaaaugaa   --c      --u        C                    cuuacac 

Annotation confidence Low

Genome context

chr21: 66936079-66936193 [+]

Mature chi-miR-493-5p

• Accession: MIMAT0036253
• Description: Capra hircus chi-miR-493-5p mature miRNA
• Sequence: 26 - UUGUACAUGGUAGGCUUUCAUU - 47
• Evidence: experimental ; Illumina [1]

Mature chi-miR-493-3p

• Accession: MIMAT0036254
• Description: Capra hircus chi-miR-493-3p mature miRNA
• Sequence: 67 - UGAAGGUCUACUGUGUGCCAGG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40