Stem-loop chi-mir-504

Accession

MI0030816

Description

Capra hircus chi-mir-504 precursor miRNA

Literature search

9 open access papers mention chi-mir-504
(64 sentences)

Sequence

20104 reads, 65.0 reads per million, 36 experiments

gcugcuguugggAGACCCUGGUCUGCACUCUGUcuguaugcuuacugaagggagcgcagggcaggguuucccauacagagggcacaggcaacca
(((.((((((((((((((((.(((((.((((.((.(((....))).))..)))).))))).)))))))))))).))))..)))...........

Structure

-----------   -g    -            G     A    -G  u   u 
           gcu  cugu ugggAGACCCUG UCUGC CUCU  Uc gua g
           |||  |||| |||||||||||| ||||| ||||  || |||  
           cgg  gaca acccuuugggac ggacg gagg  ag cau c
accaacggaca   ga    u            g     c    ga  u   u 

Annotation confidence Not enough data

Genome context

chrX: 43895051-43895144 [-]

Mature chi-miR-504-5p

• Accession: MIMAT0036268
• Description: Capra hircus chi-miR-504-5p mature miRNA
• Sequence: 13 - AGACCCUGGUCUGCACUCUGU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40