miRBase entry: chi-mir-660

Stem-loop chi-mir-660

Accession

MI0030828

Description

Capra hircus chi-mir-660 precursor miRNA

Literature search

1 open access papers mention chi-mir-660
(3 sentences)

Sequence

cugcuccuucucccgUACCCAUUGCAUAUCGGAGCUGUgaaugcucaaagcaccuccuaugugcauggauuacaggag
.........((((.(((.((((.((((((.((((.(((...........))).)))).))))))))))..))).))))

Structure

cugcuccuu    c   -C    U      C    C   gaau 
         cucc gUA  CCAU GCAUAU GGAG UGU    g
         |||| |||  |||| |||||| |||| |||    c
         gagg cau  ggua cgugua ccuc acg    u
---------    a   ua    -      u    c   aaac

Annotation confidence Not enough data

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Genome context

chrX: 82601027-82601104 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from chi-mir-660

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature chi-miR-660

Accession	MIMAT0036284
Description	Capra hircus chi-miR-660 mature miRNA
Sequence	16 - UACCCAUUGCAUAUCGGAGCUGU - 38
Evidence	experimental Illumina [1]

References

PubMed ID: 23981187
Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
"Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
"Reprod Domest Anim (2014) 49:32-40