Stem-loop chi-mir-708

Accession

MI0030832

Description

Capra hircus chi-mir-708 precursor miRNA

Sequence

cugugugugaagugguaacugcccucAAGGAGCUUACAAUCUAGCUGGGgguaaacgacuugcacaugaacgCAUCUAGACUGUGAGCUUCUAGAgggcagggaccuuacccua
......((((...(((..((((((((.(((((((((((.(((((.((.(.....................).)).))))).))))))))))).))))))))..)))))))....

Structure

cugugu    agu   aa        A           A     C  G gguaaacga 
      guga   ggu  cugcccuc AGGAGCUUACA UCUAG UG G         c
      ||||   |||  |||||||| ||||||||||| ||||| || |         u
      cauu   cca  gacgggAG UCUUCGAGUGU AGAUC AC c         u
--aucc    ---   gg        A           C     U  g aaguacacg 

Annotation confidence Low

Genome context

chr29: 16647506-16647619 [+]

Mature chi-miR-708-5p

• Accession: MIMAT0036290
• Description: Capra hircus chi-miR-708-5p mature miRNA
• Sequence: 27 - AAGGAGCUUACAAUCUAGCUGGG - 49
• Evidence: experimental ; Illumina [1]

Mature chi-miR-708-3p

• Accession: MIMAT0036291
• Description: Capra hircus chi-miR-708-3p mature miRNA
• Sequence: 73 - CAUCUAGACUGUGAGCUUCUAGA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40